

#4 What Foreign Companies in Japan Need to Know About Japan's Qualified Invoice System
Starting on October 1, 2023, Japan introduced a new invoicing system for consumption tax purposes, known as the “Qualified Invoice...
*Please be noted that the following explanation is based on the assumption that the form of the business is a joint stock company (Kabushiki Kaisha, aka KK: 株式会社) or a limited liability company (Godo Kaisha, aka GK: 合同会社).
When setting up and operating a business in Japan, understanding the country’s taxation system is critical for compliance and financial planning. Japan’s tax structure is comprehensive, covering income, transactions, and properties. These taxes are administered at both the national and local levels, ensuring a balance between centralized and regional governance.
1. Taxes on Corporate Income
Corporate income taxes form the cornerstone of Japan’s business tax system, reflecting the earnings and financial health of a company. These taxes ensure that companies contribute fairly to the national economy based on their profitability:
Corporate Income Tax (Hojinzei: 法人税): This is the primary tax levied on a company’s income and applies uniformly across industries.
National Local Corporate Tax (ChihoHoujinzei: 地方法人税): Introduced as part of a reform to balance regional economic disparities, this tax supplements corporate income tax revenues for local governments.
Corporate Inhabitant Tax (HojinJyuminzei: 法人住民税): Paid to both prefectural and municipal governments, this tax supports local infrastructure and services.
Enterprise Tax (HojinJigyozei: 法人事業税): Levied on business income, this tax directly funds prefectural-level public works and initiatives.
2. Taxes on Sales of Goods, Services and Imports
Consumption Tax (Shohizei: 消費税): Comparable to VAT in other countries, Japan’s consumption tax is currently set at 10% (with a reduced 8% rate for certain essential goods). This tax underscores Japan’s focus on equitable contribution to public revenues while keeping daily essentials affordable.
3. Taxes on Properties and Transactions
Owning property or conducting transactions in Japan comes with its own set of responsibilities. These taxes help maintain Japan’s urban planning, infrastructure, and land management systems:
Property-Related Taxes:
Fixed Asset Tax (Kotei Shisanzei: 固定資産税): Levied annually on land, buildings, and depreciable assets.
City Planning Tax (Toshi Keikakuzei: 都市計画税): Imposed on land and buildings located within designated urban planning areas to fund urban development projects.
Stamp Tax (Inshizei: 印紙税): Applied to official documents, contracts, and receipts to ensure proper documentation and compliance.
Real Property Acquisition Tax (Fudosan shutoku zei:不動産取得税): Levied on the purchase of land or buildings, promoting proper documentation and registration of real estate transactions.
Automobile-related Taxes:
Owners of vehicles in Japan are subject to the following taxes, which contribute to infrastructure maintenance and environmental regulation:
Automobile Weight Tax (Jidosha Juryo Zei: 自動車重量税): Levied based on the weight of the vehicle, primarily collected during mandatory vehicle inspections (shaken).
Automobile Tax (JidoshaZei: 自動車税): An annual tax based on the engine displacement or type of vehicle, paid by registered vehicle owners.
Light Motor Vehicle Tax (KeijidoshaZei: 軽自動車税): A specific tax for smaller vehicles with lower engine displacement, reflecting their reduced impact on infrastructure and the environment.
4. Withholding Income Tax
Withholding tax (GensenShotokuzei: 源泉所得税): Ensures immediate revenue collection from salaries, dividends, and certain other income types. It reduces administrative burdens for individuals while promoting timely compliance.
Key Compliance Notes
The above taxes consist of both national and local components. As a result, tax-related registration documents must be submitted to both the tax office (Zeimusho: 税務署) and local government offices. Proper compliance is essential to avoid penalties and to take full advantage of any available tax benefits.
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Setting up a new company in Japan requires navigating various tax registration requirements. The process can be overwhelming due to the numerous forms and strict deadlines. Failure to meet these deadlines may result in penalties and the loss of potential tax benefits. To avoid complications, we recommend consulting Quantum Accounting's professional tax accountants from the preparatory stage of incorporating your company.
Below, we summarize the required tax registration documents and their respective submission deadlines:
Documents Required Immediately After Incorporation
①Notification of Incorporation (HojinSeturituTodokesyo: 法人設立届出書)
Deadline: Within 2 months of incorporation
②Notification about Becoming Foreign Ordinary Corporation (Gaikoku futsuu hojin to natta mune no todokedesho: 外国普通法人となった旨の届出書)
Deadline: Within 2 months of acquiring permanent establishment status, starting business, or receiving income in Japan.
③Notification of Commencement of Profit-Making Business (Shueki jigyo kaishi to todokedesho: 収益事業開始等届出書)
Deadline: Within 2 months of starting profit-making business activities.
④Application for Approval of Filing a Blue Tax Return (Aoiroshinkokusyo no Shonin no Shinseisyo: 青色申告書の承認の申請書)
Deadline: Within 3 months of incorporation or the end of the first fiscal year, whichever comes first.
⑤Notification of Establishment of a Salary-Paying Office (KyuryoShiharaiJimusyo to no Kaisetutodokesyo: 給与支払事務所等の開設届出書)
Deadline: Within 1 month of establishing a salary-paying office
⑥Notification of Inventory Asset Valuation Method (Tanaoroshi shisan no hyoka hoho no todokedesho: 棚卸資産の評価方法の届出書)
Deadline: By the due date of the first tax return filing.
⑦Notification of Depreciation Method for Depreciable Assets (Genka shokyaku shisan no shokyaku hoho no todokedesho: 減価償却資産の償却方法の届出書)
Deadline: By the due date of the first tax return filing.
Additional Documents (If Applicable)
①Notification of Change (Ido todokede-sho: 異動届出書)
Required for changes in business year, tax payment location, capital amount, corporate name, business objective, mergers, and other structural changes.
②Special Provisions on Extension of the Due Date for Filing a Tax Return Under the Articles of Incorporation (Teikan no sadame to ni yoru Shinkoku kigen no encho no tokurei no Shinseisho: 定款の定め等による申告期限の延長の特例の申請書)
For companies requiring an extension of the tax return filing due date.
③Notification of Calculation Method for Book Value per Unit of Securities (Yuka shoken no ichitani atari no chobo kagaku no sanshutsu hoho no todokedesho: 有価証券の一単位当たりの帳簿価額の算出方法の届出書)
Required if the company acquires new securities or securities of a different type or category.
④Application for Approval Made in Relation to the Special Provision for Due Dates for Withholding Tax (Gensencyoushuzei no Noki no Tokurei no Shonin nikansuru Shinseisho: 源泉徴収税の納期の特例の承認に関する申請書)
Applicable to companies with fewer than 10 employees requesting extended withholding tax due dates.
Consumption Tax-Related Notifications
①Report of the Selection of Taxable Proprietor Status for Consumption Tax (Shohizei kazei jigyosha sentaku todokedesho: 消費税課税事業者選択届出書)
Required when opting to be a taxable proprietor even if the base period taxable sales are less than 10 million yen.
②Notification of Choosing/ Changing Application for Special Provisions on Taxable Period for Consumption Tax (Shohizei no kazei kikan tokurei sentaku henko todokedesho: 消費税の課税期間特例選択・変更届出書)
For companies applying for special provisions regarding taxable periods.
③Notification on Taxable Enterprise Status for Consumption Tax (Shohizei kazei jigyosha todokede-sho: 消費税課税事業者届出書)
Required if taxable sales exceed 10 million yen
④Notification of Being Qualified for a Newly Established Corporation for Consumption Tax (Shohizei no shinsestsu hojin ni gaito suru mishi no todokede-sho: 消費税の新設法人に該当する旨の届出書)
For newly established corporations with capital exceeding 10 million yen.
⑤Notification of Being Qualified for a Specified Newly Established Corporation for Consumption Tax (Shohizei no tokutei shinsestsu hojin ni gaito suru mune no todokedesho: 消費税の特定新設法人に該当する旨の届出書)
For newly established corporations with capital less than 10 million yen.
⑥Notification of Appointment of a Tax Agent for Consumption Tax (Shohizei Nozei Kanri Nin Todokedesho: 消費税納税管理人届出書):
Required when appointing a tax agent for consumption tax purposes.
⑦Report on the Selection of the Simplified Tax System for Consumption Tax (Shohizei Kani Kazei Seido Sentaku Todokedesho: 消費税簡易課税制度選択届出書):
For companies opting for simplified tax treatment when taxable sales in the base period do not exceed 50 million yen.
⑧Report on Extension of Consumption Tax Filing Due Date (Shohizei no Shinkoku Kigen Encho no Todokedesho: 消費税の申告期限延長の届出書):
For extending the filing deadline for the final consumption tax return.
Navigating Japan’s tax registration process can be complex, especially for newly established companies. Ensuring timely and accurate submission of these documents is crucial to avoid penalties and maximize available tax benefits. Partnering with our experienced tax professionals at Quantum Accounting can help streamline this process, allowing you to focus on building and growing your business with confidence.
Here we explain each task divided into six steps
If you are considering expanding your business to Japan, please contact Quantum Accounting Inc. for a free consultation during the planning phase or general consultation (available in both English and Japanese). Quantum Accounting's professionals are experts in accounting, tax, legal, and labor issues. Our goal is to provide you with a one-stop professional firm for all the services you need to expand your business into Japan.
We are confident that we can help you. For further information, please contact from CONTACT US.